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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs10108164 chr8:20754622 C/T TNKS chr8:9413424-9639856:+ -0.77 -6.88 2.38E-11 Box Plot
BLCA rs10108164 chr8:20754622 C/T VPS37A chr8:17104080-17159936:+ -0.84 -6.37 5.54E-10 Box Plot
BLCA rs10108164 chr8:20754622 C/T XPO7 chr8:21777182-21864096:+ -0.96 -7.19 3.38E-12 Box Plot
BLCA rs10109376 chr8:18331565 A/T CNOT7 chr8:17082473-17104387:- -0.76 -6.19 1.57E-9 Box Plot
BLCA rs10112831 chr8:26322344 C/T CCDC25 chr8:27590828-27630170:- 0.59 6.19 1.55E-9 Box Plot
BLCA rs10112831 chr8:26322344 C/T ELP3 chr8:27947190-28048673:+ 0.61 6.37 5.42E-10 Box Plot
BLCA rs10112831 chr8:26322344 C/T INTS9 chr8:28625178-28747759:- 0.57 5.96 5.65E-9 Box Plot
BLCA rs10117586 chr9:8185403 A/G KIAA0020 chr9:2720469-2844241:- 0.66 6.35 6.04E-10 Box Plot
BLCA rs10117586 chr9:8185403 A/G KIAA2026 chr9:5881596-6007901:- 0.65 6.08 2.98E-9 Box Plot
BLCA rs10117586 chr9:8185403 A/G SNAPC3 chr9:15422702-15465951:+ 0.78 6.95 1.62E-11 Box Plot
BLCA rs10125605 chr9:18425935 A/G PSIP1 chr9:15464064-15511017:- -0.58 -6 4.47E-9 Box Plot
BLCA rs10127971 chr1:5628914 C/T UBE2J2 chr1:1189289-1209265:- -0.55 -6.33 7.03E-10 Box Plot
BLCA rs10130008 chr14:39791049 C/G LOC647288 chr13:75811890-75814517:- -0.41 -6.57 1.62E-10 Box Plot
BLCA rs10133417 chr14:39764587 A/T LOC647288 chr13:75811890-75814517:- -0.4 -6.37 5.4E-10 Box Plot
BLCA rs10136480 chr14:77465460 C/T ABCD4 chr14:74752126-74769759:- 0.7 6.28 9.08E-10 Box Plot